Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AC244669.2-201ENST00000612320 853 ntBASIC17.18■□□□□ 0.34
HERC6Q8IVU3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 RHOXF1P1-202ENST00000635473 501 ntBASIC17.18■□□□□ 0.34
HERC6Q8IVU3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HERC6Q8IVU3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 MSTO2P-201ENST00000314835 1709 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TOMM22P5-201ENST00000416399 439 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC006033.1-201ENST00000440505 426 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC106760.1-201ENST00000508690 800 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 KRT90P-201ENST00000549264 1064 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 DUX4L45-201ENST00000566406 1057 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AP001063.1-201ENST00000568332 529 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AL049840.4-201ENST00000602422 811 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 AL118558.3-201ENST00000607414 1079 ntBASIC17.17■□□□□ 0.34
HERC6Q8IVU3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HERC6Q8IVU3 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 VDAC1P7-201ENST00000462417 847 ntBASIC17.16■□□□□ 0.34
HERC6Q8IVU3 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC17.16■□□□□ 0.34
HERC6Q8IVU3 AC008687.7-202ENST00000637404 953 ntBASIC17.16■□□□□ 0.34
HERC6Q8IVU3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms