Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 PMS2P7-201ENST00000506558 1336 ntBASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CCDC50Q8IVM0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 PRYP6-201ENST00000514804 343 ntBASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AC145285.3-201ENST00000564603 959 ntBASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AC068137.2-201ENST00000605408 478 ntBASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 WASH6P-202ENST00000359512 1437 ntBASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 AC138035.3-201ENST00000622706 2791 ntBASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CCDC50Q8IVM0 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 KRT18P2-201ENST00000447938 1258 ntBASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 RPL13AP23-201ENST00000480739 586 ntBASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AL121894.2-201ENST00000602977 491 ntBASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AL161645.1-201ENST00000622716 1255 ntBASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 AL589702.1-201ENST00000641229 1509 ntBASIC16.91■□□□□ 0.3
CCDC50Q8IVM0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms