Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
KRT28Q7Z3Y7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 HNRNPA1P63-201ENST00000427917 963 ntBASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AC114812.1-204ENST00000449669 728 ntBASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TMEM198B-204ENST00000484016 896 ntBASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AC044849.1-201ENST00000519737 1188 ntBASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KRT28Q7Z3Y7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PTPA-217ENST00000434095 870 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 AC245884.6-201ENST00000515672 1067 ntBASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KRT28Q7Z3Y7 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC21.2■□□□□ 0.99
KRT28Q7Z3Y7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.99
KRT28Q7Z3Y7 AC148477.4-201ENST00000613430 1793 ntBASIC21.2■□□□□ 0.99
KRT28Q7Z3Y7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 HLA-DQB2-229ENST00000411527 1059 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 AC253536.4-201ENST00000440539 267 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 SPTLC1P5-201ENST00000450718 252 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 COX5BP1-201ENST00000507622 393 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 AC007663.3-201ENST00000609632 465 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 CU633904.3-201ENST00000624042 1029 ntBASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
KRT28Q7Z3Y7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms