Protein–RNA interactions for Protein: Q6UXN2

TREML4, Trem-like transcript 4 protein, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREML4Q6UXN2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 RBPMS2P1-201ENST00000437762 623 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 RN7SL692P-201ENST00000464677 288 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AL596325.1-201ENST00000563991 1082 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CLIC4P2-201ENST00000601934 717 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AC022960.2-201ENST00000616300 666 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 TOP3BP1-201ENST00000420768 1380 ntBASIC13.19□□□□□ -0.3
TREML4Q6UXN2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TREML4Q6UXN2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AC092850.2-201ENST00000623821 2697 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AL590787.1-201ENST00000568856 1315 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 PIN1P1-201ENST00000412108 996 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SPDYE7P-202ENST00000420373 878 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SDR42E1P3-201ENST00000438345 502 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CSNK1A1-209ENST00000606299 1075 ntTSL 3 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AL158211.3-201ENST00000607385 239 ntBASIC13.18□□□□□ -0.3
TREML4Q6UXN2 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TREML4Q6UXN2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms