Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 AL136982.4-201ENST00000437689 1740 ntBASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 AC245100.3-201ENST00000441281 285 ntBASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 SPDYE14P-201ENST00000442619 822 ntBASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 MIR6799-201ENST00000620297 69 ntBASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 AC011477.6-201ENST00000604980 1927 ntBASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.84■□□□□ 0.45
HERC4Q5GLZ8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 CICP6-201ENST00000457191 2729 ntBASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HERC4Q5GLZ8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PIN1P1-201ENST00000412108 996 ntBASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 AL139010.1-201ENST00000454878 894 ntBASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 RN7SL692P-201ENST00000464677 288 ntBASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 BNIP3P1-202ENST00000550043 1585 ntBASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HERC4Q5GLZ8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HERC4Q5GLZ8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms