Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ACTG1P3-201ENST00000431775 1114 ntBASIC18.53■□□□□ 0.56
CERKLQ49MI3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 SLC25A47P1-201ENST00000531577 414 ntBASIC18.53■□□□□ 0.56
CERKLQ49MI3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ENPP7P5-201ENST00000541031 1031 ntBASIC18.53■□□□□ 0.56
CERKLQ49MI3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 AC124283.3-201ENST00000570869 594 ntBASIC18.53■□□□□ 0.56
CERKLQ49MI3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 AL121723.1-201ENST00000445194 1519 ntBASIC18.53■□□□□ 0.56
CERKLQ49MI3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.53■□□□□ 0.56
CERKLQ49MI3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CERKLQ49MI3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 CROCCP4-201ENST00000457096 498 ntBASIC18.52■□□□□ 0.56
CERKLQ49MI3 VDAC1P7-201ENST00000462417 847 ntBASIC18.52■□□□□ 0.56
CERKLQ49MI3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.52■□□□□ 0.56
CERKLQ49MI3 MIR5189-201ENST00000577370 114 ntBASIC18.52■□□□□ 0.56
CERKLQ49MI3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CERKLQ49MI3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CERKLQ49MI3 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
CERKLQ49MI3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.52■□□□□ 0.55
CERKLQ49MI3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CERKLQ49MI3 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 MTHFR-217ENST00000641820 1569 ntBASIC18.51■□□□□ 0.55
CERKLQ49MI3 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 SOCS2P1-201ENST00000417727 557 ntBASIC18.51■□□□□ 0.55
CERKLQ49MI3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CERKLQ49MI3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 KRT18P43-201ENST00000469825 1281 ntBASIC18.51■□□□□ 0.55
CERKLQ49MI3 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 TDH-203ENST00000531764 1110 ntBASIC18.51■□□□□ 0.55
CERKLQ49MI3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.51■□□□□ 0.55
CERKLQ49MI3 AC120045.2-201ENST00000567334 178 ntBASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 220.9 ms