Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40BQ12829 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40BQ12829 SAPCD2P3-201ENST00000455031 850 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40BQ12829 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.32□□□□□ -0.12
RAB40BQ12829 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.32□□□□□ -0.12
RAB40BQ12829 AL078644.1-201ENST00000609881 752 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 AC004790.2-201ENST00000623588 572 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 AC005593.1-201ENST00000624894 515 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 MYO15B-237ENST00000642007 4893 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 OR2I1P-209ENST00000641730 5365 ntBASIC14.32□□□□□ -0.12
RAB40BQ12829 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RAB40BQ12829 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.32□□□□□ -0.12
RAB40BQ12829 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RAB40BQ12829 AC127383.1-201ENST00000444697 1800 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 RPS2P1-201ENST00000434010 821 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.31□□□□□ -0.12
RAB40BQ12829 AC108073.2-201ENST00000464002 357 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40BQ12829 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 AC091304.2-201ENST00000564639 760 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.31□□□□□ -0.12
RAB40BQ12829 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.31□□□□□ -0.12
RAB40BQ12829 AC008735.5-201ENST00000623544 497 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 LINC00552-201ENST00000625151 2579 ntBASIC14.31□□□□□ -0.12
RAB40BQ12829 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
RAB40BQ12829 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RAB40BQ12829 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RAB40BQ12829 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40BQ12829 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 AC148477.4-201ENST00000613430 1793 ntBASIC14.3□□□□□ -0.12
RAB40BQ12829 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB40BQ12829 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
RAB40BQ12829 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.3□□□□□ -0.12
RAB40BQ12829 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
RAB40BQ12829 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.3□□□□□ -0.12
RAB40BQ12829 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RAB40BQ12829 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAB40BQ12829 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms