Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 ATP5G2P4-201ENST00000442175 420 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 RAB43P1-201ENST00000561790 589 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AL359711.2-201ENST00000563105 872 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 MIR4313-201ENST00000580760 101 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AC010319.3-201ENST00000597028 470 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AL049840.4-201ENST00000602422 811 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 MIR6752-201ENST00000618442 71 ntBASIC17.26■□□□□ 0.35
CDC42EP1Q00587 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDC42EP1Q00587 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 MXI1-205ENST00000393134 889 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 BOLA2P3-201ENST00000404566 256 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC009486.1-201ENST00000569860 813 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 BTNL10-201ENST00000595971 695 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC093813.1-201ENST00000605066 256 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC017083.2-201ENST00000608069 979 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 AC018892.3-201ENST00000623986 2499 ntBASIC17.25■□□□□ 0.35
CDC42EP1Q00587 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CDC42EP1Q00587 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 CYP2T1P-202ENST00000641596 2535 ntBASIC17.24■□□□□ 0.35
CDC42EP1Q00587 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDC42EP1Q00587 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms