Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.24□□□□□ -0.13
EFNB1P98172 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 AL773604.1-201ENST00000617417 272 ntBASIC14.24□□□□□ -0.13
EFNB1P98172 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EFNB1P98172 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
EFNB1P98172 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
EFNB1P98172 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.24□□□□□ -0.13
EFNB1P98172 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
EFNB1P98172 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 AC079776.4-201ENST00000511039 504 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 AC105233.2-201ENST00000523697 349 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB1P98172 AF228730.5-201ENST00000530288 346 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
EFNB1P98172 AP002472.1-201ENST00000577490 586 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 AC104692.2-201ENST00000603054 253 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.23□□□□□ -0.13
EFNB1P98172 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.23□□□□□ -0.13
EFNB1P98172 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 KRT8P37-201ENST00000451609 1420 ntBASIC14.23□□□□□ -0.13
EFNB1P98172 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.23□□□□□ -0.13
EFNB1P98172 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EFNB1P98172 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
EFNB1P98172 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB1P98172 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.22□□□□□ -0.13
EFNB1P98172 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB1P98172 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB1P98172 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
EFNB1P98172 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB1P98172 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB1P98172 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.22□□□□□ -0.13
EFNB1P98172 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.22□□□□□ -0.13
EFNB1P98172 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.22□□□□□ -0.13
EFNB1P98172 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
EFNB1P98172 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms