Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CALY-202ENST00000368555 783 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NKX6-1P78426 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.14□□□□□ -0.15
NKX6-1P78426 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.14□□□□□ -0.15
NKX6-1P78426 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX6-1P78426 GPR53P-205ENST00000457298 1084 ntBASIC14.14□□□□□ -0.15
NKX6-1P78426 AC098859.1-201ENST00000502915 1238 ntBASIC14.14□□□□□ -0.15
NKX6-1P78426 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX6-1P78426 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX6-1P78426 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.14□□□□□ -0.15
NKX6-1P78426 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.14□□□□□ -0.15
NKX6-1P78426 AC018529.1-201ENST00000613063 361 ntBASIC14.14□□□□□ -0.15
NKX6-1P78426 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 LINC01144-201ENST00000626198 1710 ntBASIC14.14□□□□□ -0.15
NKX6-1P78426 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NKX6-1P78426 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.14□□□□□ -0.15
NKX6-1P78426 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NKX6-1P78426 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 SBF1P1-201ENST00000444527 5631 ntBASIC14.13□□□□□ -0.15
NKX6-1P78426 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 ARSEP1-201ENST00000420443 635 ntBASIC14.13□□□□□ -0.15
NKX6-1P78426 TSSK5P-201ENST00000423978 907 ntBASIC14.13□□□□□ -0.15
NKX6-1P78426 AGGF1P2-201ENST00000426656 2106 ntBASIC14.13□□□□□ -0.15
NKX6-1P78426 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX6-1P78426 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX6-1P78426 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX6-1P78426 SPTSSB-204ENST00000617024 1292 ntBASIC14.13□□□□□ -0.15
NKX6-1P78426 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NKX6-1P78426 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.13□□□□□ -0.15
NKX6-1P78426 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NKX6-1P78426 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.13□□□□□ -0.15
NKX6-1P78426 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
NKX6-1P78426 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 FAM220BP-201ENST00000377689 816 ntBASIC14.12□□□□□ -0.15
NKX6-1P78426 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
NKX6-1P78426 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX6-1P78426 SPTLC1P1-201ENST00000447199 261 ntBASIC14.12□□□□□ -0.15
NKX6-1P78426 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 IGHV3-71-201ENST00000523324 359 ntBASIC14.12□□□□□ -0.15
NKX6-1P78426 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 RARRES2P9-201ENST00000565168 469 ntBASIC14.12□□□□□ -0.15
NKX6-1P78426 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
NKX6-1P78426 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.12□□□□□ -0.15
NKX6-1P78426 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.12□□□□□ -0.15
NKX6-1P78426 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
NKX6-1P78426 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms