Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
PRAMEP78395 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PRAMEP78395 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 MIR346-201ENST00000362234 95 ntBASIC16.15■□□□□ 0.18
PRAMEP78395 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PRAMEP78395 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEP78395 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.15■□□□□ 0.18
PRAMEP78395 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.15■□□□□ 0.18
PRAMEP78395 LINC01225-203ENST00000563550 1244 ntBASIC16.15■□□□□ 0.18
PRAMEP78395 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PRAMEP78395 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.15■□□□□ 0.18
PRAMEP78395 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PRAMEP78395 AC134407.2-201ENST00000625089 1978 ntBASIC16.15■□□□□ 0.18
PRAMEP78395 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEP78395 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEP78395 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PRAMEP78395 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 AC011477.6-201ENST00000604980 1927 ntBASIC16.14■□□□□ 0.17
PRAMEP78395 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 BX842568.4-201ENST00000421222 227 ntBASIC16.14■□□□□ 0.17
PRAMEP78395 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 AC069335.1-201ENST00000489972 472 ntBASIC16.14■□□□□ 0.17
PRAMEP78395 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.14■□□□□ 0.17
PRAMEP78395 AC243562.2-201ENST00000561247 970 ntBASIC16.14■□□□□ 0.17
PRAMEP78395 MIR4469-201ENST00000583919 79 ntBASIC16.14■□□□□ 0.17
PRAMEP78395 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
PRAMEP78395 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
PRAMEP78395 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.14■□□□□ 0.17
PRAMEP78395 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.13■□□□□ 0.17
PRAMEP78395 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
PRAMEP78395 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRAMEP78395 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms