Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.41□□□□□ -0.1
RPS4XP62701 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.41□□□□□ -0.1
RPS4XP62701 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.41□□□□□ -0.1
RPS4XP62701 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
RPS4XP62701 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.41□□□□□ -0.1
RPS4XP62701 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS4XP62701 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
RPS4XP62701 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 AL136982.4-201ENST00000437689 1740 ntBASIC14.41□□□□□ -0.1
RPS4XP62701 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RPS4XP62701 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 AC018892.3-201ENST00000623986 2499 ntBASIC14.4□□□□□ -0.1
RPS4XP62701 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RPS4XP62701 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 AL035633.1-201ENST00000406139 838 ntBASIC14.4□□□□□ -0.1
RPS4XP62701 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS4XP62701 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS4XP62701 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.4□□□□□ -0.1
RPS4XP62701 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 AC005498.2-205ENST00000593218 784 ntBASIC14.4□□□□□ -0.1
RPS4XP62701 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.4□□□□□ -0.1
RPS4XP62701 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS4XP62701 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.4□□□□□ -0.1
RPS4XP62701 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.4□□□□□ -0.1
RPS4XP62701 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RPS4XP62701 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.4□□□□□ -0.11
RPS4XP62701 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 AC144831.1-201ENST00000573312 2656 ntBASIC14.39□□□□□ -0.11
RPS4XP62701 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.39□□□□□ -0.11
RPS4XP62701 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 CYP4F24P-201ENST00000586049 1580 ntBASIC14.39□□□□□ -0.11
RPS4XP62701 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.39□□□□□ -0.11
RPS4XP62701 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.39□□□□□ -0.11
RPS4XP62701 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.39□□□□□ -0.11
RPS4XP62701 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.39□□□□□ -0.11
RPS4XP62701 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 AC093214.1-201ENST00000511688 1107 ntBASIC14.39□□□□□ -0.11
RPS4XP62701 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.39□□□□□ -0.11
RPS4XP62701 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.39□□□□□ -0.11
RPS4XP62701 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.39□□□□□ -0.11
RPS4XP62701 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.39□□□□□ -0.11
RPS4XP62701 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 AC087481.3-201ENST00000602886 1894 ntBASIC14.39□□□□□ -0.11
RPS4XP62701 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RPS4XP62701 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms