Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC11.68□□□□□ -0.54
APOC4P55056 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.68□□□□□ -0.54
APOC4P55056 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
APOC4P55056 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 BNIP3P1-202ENST00000550043 1585 ntBASIC11.67□□□□□ -0.54
APOC4P55056 AC092171.3-201ENST00000610122 2651 ntBASIC11.67□□□□□ -0.54
APOC4P55056 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 AC063926.2-201ENST00000623766 1308 ntBASIC11.67□□□□□ -0.54
APOC4P55056 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 COPE-202ENST00000349893 948 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 AC098614.1-201ENST00000368528 745 ntBASIC11.67□□□□□ -0.54
APOC4P55056 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 AC005034.1-201ENST00000426657 489 ntBASIC11.67□□□□□ -0.54
APOC4P55056 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC11.67□□□□□ -0.54
APOC4P55056 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.67□□□□□ -0.54
APOC4P55056 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.67□□□□□ -0.54
APOC4P55056 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 RRP7BP-205ENST00000566851 833 ntBASIC11.67□□□□□ -0.54
APOC4P55056 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 AL450472.2-201ENST00000603663 1156 ntBASIC11.67□□□□□ -0.54
APOC4P55056 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC11.67□□□□□ -0.54
APOC4P55056 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
APOC4P55056 PCDHA3-202ENST00000532566 4594 ntBASIC11.67□□□□□ -0.54
APOC4P55056 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
APOC4P55056 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
APOC4P55056 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
APOC4P55056 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.67□□□□□ -0.54
APOC4P55056 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
APOC4P55056 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
APOC4P55056 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC11.66□□□□□ -0.54
APOC4P55056 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC11.66□□□□□ -0.54
APOC4P55056 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
APOC4P55056 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
APOC4P55056 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms