Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PMS1P54277 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.55■□□□□ 0.4
PMS1P54277 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PMS1P54277 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PMS1P54277 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PMS1P54277 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.54■□□□□ 0.4
PMS1P54277 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 AL627223.1-201ENST00000416693 442 ntBASIC17.54■□□□□ 0.4
PMS1P54277 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 ALG1L8P-201ENST00000533887 760 ntBASIC17.54■□□□□ 0.4
PMS1P54277 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.54■□□□□ 0.4
PMS1P54277 HNRNPUP1-201ENST00000554987 333 ntBASIC17.54■□□□□ 0.4
PMS1P54277 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 AC010327.4-202ENST00000591484 748 ntBASIC17.54■□□□□ 0.4
PMS1P54277 AL450472.2-201ENST00000603663 1156 ntBASIC17.54■□□□□ 0.4
PMS1P54277 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PMS1P54277 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PMS1P54277 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.53■□□□□ 0.4
PMS1P54277 AC005237.2-201ENST00000434368 219 ntBASIC17.53■□□□□ 0.4
PMS1P54277 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.53■□□□□ 0.4
PMS1P54277 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.53■□□□□ 0.4
PMS1P54277 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.53■□□□□ 0.4
PMS1P54277 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.53■□□□□ 0.4
PMS1P54277 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.53■□□□□ 0.4
PMS1P54277 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PMS1P54277 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.53■□□□□ 0.4
PMS1P54277 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.52■□□□□ 0.4
PMS1P54277 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 RPSAP43-201ENST00000402237 625 ntBASIC17.52■□□□□ 0.4
PMS1P54277 AZGP1P1-201ENST00000411909 902 ntBASIC17.52■□□□□ 0.4
PMS1P54277 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
PMS1P54277 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.52■□□□□ 0.4
PMS1P54277 PHKG1P2-201ENST00000457537 863 ntBASIC17.52■□□□□ 0.4
PMS1P54277 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.52■□□□□ 0.4
PMS1P54277 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.4
PMS1P54277 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PMS1P54277 AC055717.3-201ENST00000622967 595 ntBASIC17.52■□□□□ 0.4
PMS1P54277 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PMS1P54277 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.52■□□□□ 0.4
PMS1P54277 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
PMS1P54277 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.52■□□□□ 0.4
PMS1P54277 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.52■□□□□ 0.4
PMS1P54277 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms