Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
NUP98P52948 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 AC245100.3-201ENST00000441281 285 ntBASIC19.46■□□□□ 0.71
NUP98P52948 HSPB1P2-201ENST00000448722 546 ntBASIC19.46■□□□□ 0.71
NUP98P52948 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.46■□□□□ 0.71
NUP98P52948 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.46■□□□□ 0.71
NUP98P52948 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 AC073413.1-201ENST00000603927 732 ntBASIC19.46■□□□□ 0.71
NUP98P52948 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC19.46■□□□□ 0.71
NUP98P52948 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
NUP98P52948 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NUP98P52948 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.46■□□□□ 0.71
NUP98P52948 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.45■□□□□ 0.7
NUP98P52948 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 KRT8P14-201ENST00000414254 1442 ntBASIC19.45■□□□□ 0.7
NUP98P52948 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
NUP98P52948 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 MIR663B-201ENST00000408361 115 ntBASIC19.45■□□□□ 0.7
NUP98P52948 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.45■□□□□ 0.7
NUP98P52948 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.45■□□□□ 0.7
NUP98P52948 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 AL008638.5-201ENST00000623814 1298 ntBASIC19.45■□□□□ 0.7
NUP98P52948 PRSS30P-206ENST00000641773 873 ntBASIC19.45■□□□□ 0.7
NUP98P52948 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 AL158070.2-201ENST00000623713 1621 ntBASIC19.45■□□□□ 0.7
NUP98P52948 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NUP98P52948 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.45■□□□□ 0.7
NUP98P52948 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NUP98P52948 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NUP98P52948 AC084364.1-201ENST00000551967 1556 ntBASIC19.44■□□□□ 0.7
NUP98P52948 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NUP98P52948 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
NUP98P52948 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 AC106820.3-201ENST00000561653 397 ntBASIC19.44■□□□□ 0.7
NUP98P52948 MIR3615-201ENST00000581999 87 ntBASIC19.44■□□□□ 0.7
NUP98P52948 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.44■□□□□ 0.7
NUP98P52948 AC025181.2-201ENST00000606994 802 ntBASIC19.44■□□□□ 0.7
NUP98P52948 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
NUP98P52948 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
NUP98P52948 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
NUP98P52948 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 AC104457.1-201ENST00000401024 814 ntBASIC19.44■□□□□ 0.7
NUP98P52948 HOMER2P2-201ENST00000451621 847 ntBASIC19.44■□□□□ 0.7
NUP98P52948 AC004066.1-201ENST00000502488 802 ntBASIC19.44■□□□□ 0.7
NUP98P52948 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC19.44■□□□□ 0.7
NUP98P52948 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.44■□□□□ 0.7
NUP98P52948 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NUP98P52948 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NUP98P52948 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 AC006449.5-201ENST00000610658 2098 ntBASIC19.43■□□□□ 0.7
NUP98P52948 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP98P52948 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.43■□□□□ 0.7
NUP98P52948 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC19.43■□□□□ 0.7
NUP98P52948 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NUP98P52948 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms