Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCN4P51793 AC009486.1-201ENST00000569860 813 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
CLCN4P51793 MIR6787-201ENST00000616675 61 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 GPR182-203ENST00000622922 591 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCN4P51793 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCN4P51793 AC134407.2-201ENST00000625089 1978 ntBASIC16.68■□□□□ 0.26
CLCN4P51793 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 AL133338.1-201ENST00000565695 1517 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 BAATP1-201ENST00000412284 1225 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 FAM21FP-201ENST00000426241 1131 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.67■□□□□ 0.26
CLCN4P51793 AC007551.1-201ENST00000457394 519 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN4P51793 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN4P51793 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN4P51793 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.67■□□□□ 0.26
CLCN4P51793 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.67■□□□□ 0.26
CLCN4P51793 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.67■□□□□ 0.26
CLCN4P51793 AC124067.4-201ENST00000519691 2379 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 REXO1L1P-202ENST00000608646 1974 ntBASIC16.67■□□□□ 0.26
CLCN4P51793 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CLCN4P51793 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN4P51793 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 KRT8P44-201ENST00000441609 1350 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN4P51793 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCN4P51793 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLCN4P51793 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CLCN4P51793 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 MSTO2P-201ENST00000314835 1709 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 BRWD1P1-201ENST00000401091 371 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN4P51793 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 AC012441.1-201ENST00000446669 685 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN4P51793 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN4P51793 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN4P51793 FTH1P14-201ENST00000482930 551 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.66■□□□□ 0.26
CLCN4P51793 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.66■□□□□ 0.26
CLCN4P51793 HNRNPUP1-201ENST00000554987 333 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.66■□□□□ 0.26
CLCN4P51793 AL450472.2-201ENST00000603663 1156 ntBASIC16.66■□□□□ 0.26
CLCN4P51793 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CLCN4P51793 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.66■□□□□ 0.26
CLCN4P51793 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CLCN4P51793 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms