Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CENPAP49450 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.56□□□□□ -0.08
CENPAP49450 AC007967.2-201ENST00000432613 625 ntBASIC14.56□□□□□ -0.08
CENPAP49450 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.56□□□□□ -0.08
CENPAP49450 AC109635.5-201ENST00000533593 962 ntBASIC14.56□□□□□ -0.08
CENPAP49450 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.56□□□□□ -0.08
CENPAP49450 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.56□□□□□ -0.08
CENPAP49450 AC096734.2-201ENST00000562054 433 ntBASIC14.56□□□□□ -0.08
CENPAP49450 AC018845.2-201ENST00000568326 409 ntBASIC14.56□□□□□ -0.08
CENPAP49450 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CENPAP49450 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CENPAP49450 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 AC104109.2-201ENST00000602919 1418 ntBASIC14.56□□□□□ -0.08
CENPAP49450 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.56□□□□□ -0.08
CENPAP49450 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CENPAP49450 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 CICP14-201ENST00000629111 2732 ntBASIC14.55□□□□□ -0.08
CENPAP49450 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.55□□□□□ -0.08
CENPAP49450 IGHV3-22-201ENST00000520721 359 ntBASIC14.55□□□□□ -0.08
CENPAP49450 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.55□□□□□ -0.08
CENPAP49450 SLC25A6P4-201ENST00000586535 553 ntBASIC14.55□□□□□ -0.08
CENPAP49450 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CENPAP49450 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 AC025580.3-201ENST00000617932 1424 ntBASIC14.55□□□□□ -0.08
CENPAP49450 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CENPAP49450 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.55□□□□□ -0.08
CENPAP49450 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
CENPAP49450 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
CENPAP49450 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.54□□□□□ -0.08
CENPAP49450 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CENPAP49450 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.54□□□□□ -0.08
CENPAP49450 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms