Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AL139094.1-201ENST00000405549 1188 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TM4SF4P48230 POM121L8P-201ENST00000417732 1281 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 POM121L9P-203ENST00000441984 1285 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 NOC2LP1-201ENST00000450578 752 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 AL353637.1-201ENST00000451571 732 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 CEP164P1-201ENST00000455142 418 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.81■□□□□ 0.44
TM4SF4P48230 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.81■□□□□ 0.44
TM4SF4P48230 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.81■□□□□ 0.44
TM4SF4P48230 AP003171.2-201ENST00000528208 925 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC17.81■□□□□ 0.44
TM4SF4P48230 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.81■□□□□ 0.44
TM4SF4P48230 AC020922.3-201ENST00000595064 547 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC17.81■□□□□ 0.44
TM4SF4P48230 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.81■□□□□ 0.44
TM4SF4P48230 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
TM4SF4P48230 AC006453.1-201ENST00000636037 1257 ntBASIC17.81■□□□□ 0.44
TM4SF4P48230 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
TM4SF4P48230 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
TM4SF4P48230 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF4P48230 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TM4SF4P48230 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 RPL13AP19-201ENST00000434320 584 ntBASIC17.8■□□□□ 0.44
TM4SF4P48230 AC104073.2-201ENST00000453737 312 ntBASIC17.8■□□□□ 0.44
TM4SF4P48230 AL391280.1-201ENST00000506969 1062 ntBASIC17.8■□□□□ 0.44
TM4SF4P48230 MARK2P5-201ENST00000507649 634 ntBASIC17.8■□□□□ 0.44
TM4SF4P48230 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.8■□□□□ 0.44
TM4SF4P48230 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC17.8■□□□□ 0.44
TM4SF4P48230 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.8■□□□□ 0.44
TM4SF4P48230 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TM4SF4P48230 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF4P48230 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF4P48230 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
TM4SF4P48230 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 AL645937.2-201ENST00000396808 931 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 RPSAP31-201ENST00000416648 895 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.79■□□□□ 0.44
TM4SF4P48230 RNMTL1P1-201ENST00000454103 560 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 RN7SL181P-201ENST00000462921 277 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.79■□□□□ 0.44
TM4SF4P48230 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.79■□□□□ 0.44
TM4SF4P48230 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.79■□□□□ 0.44
TM4SF4P48230 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 AC103988.2-201ENST00000561804 725 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 AL157791.1-201ENST00000553667 1699 ntBASIC17.79■□□□□ 0.44
TM4SF4P48230 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.79■□□□□ 0.44
TM4SF4P48230 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.79■□□□□ 0.44
TM4SF4P48230 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF4P48230 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF4P48230 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms