Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
COPB2P35606 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.16■□□□□ 0.5
COPB2P35606 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.16■□□□□ 0.5
COPB2P35606 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.16■□□□□ 0.5
COPB2P35606 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPB2P35606 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPB2P35606 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPB2P35606 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
COPB2P35606 AC018665.1-201ENST00000622927 1362 ntBASIC18.16■□□□□ 0.5
COPB2P35606 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COPB2P35606 ME2P1-201ENST00000426028 1970 ntBASIC18.15■□□□□ 0.5
COPB2P35606 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 INTS4P2-202ENST00000614726 2019 ntBASIC18.15■□□□□ 0.5
COPB2P35606 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
COPB2P35606 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
COPB2P35606 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COPB2P35606 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COPB2P35606 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.15■□□□□ 0.5
COPB2P35606 AC119751.2-201ENST00000504529 210 ntBASIC18.15■□□□□ 0.5
COPB2P35606 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
COPB2P35606 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
COPB2P35606 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.15■□□□□ 0.5
COPB2P35606 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COPB2P35606 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.15■□□□□ 0.5
COPB2P35606 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC18.15■□□□□ 0.5
COPB2P35606 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC18.15■□□□□ 0.5
COPB2P35606 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
COPB2P35606 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
COPB2P35606 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
COPB2P35606 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
COPB2P35606 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
COPB2P35606 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.14■□□□□ 0.5
COPB2P35606 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.14■□□□□ 0.49
COPB2P35606 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COPB2P35606 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COPB2P35606 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
COPB2P35606 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.14■□□□□ 0.49
COPB2P35606 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.14■□□□□ 0.49
COPB2P35606 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.14■□□□□ 0.49
COPB2P35606 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.14■□□□□ 0.49
COPB2P35606 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.14■□□□□ 0.49
COPB2P35606 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.14■□□□□ 0.49
COPB2P35606 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.14■□□□□ 0.49
COPB2P35606 AL359711.2-201ENST00000563105 872 ntBASIC18.14■□□□□ 0.49
COPB2P35606 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.14■□□□□ 0.49
COPB2P35606 MIR6775-201ENST00000617557 69 ntBASIC18.14■□□□□ 0.49
COPB2P35606 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.14■□□□□ 0.49
COPB2P35606 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.14■□□□□ 0.49
COPB2P35606 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COPB2P35606 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.13■□□□□ 0.49
COPB2P35606 REXO1L1P-202ENST00000608646 1974 ntBASIC18.13■□□□□ 0.49
COPB2P35606 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COPB2P35606 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COPB2P35606 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.13■□□□□ 0.49
COPB2P35606 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms