Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TM4SF1P30408 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TM4SF1P30408 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC19.49■□□□□ 0.71
TM4SF1P30408 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
TM4SF1P30408 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TM4SF1P30408 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 AC148477.4-201ENST00000613430 1793 ntBASIC19.48■□□□□ 0.71
TM4SF1P30408 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 AC091046.1-201ENST00000331871 207 ntBASIC19.48■□□□□ 0.71
TM4SF1P30408 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TM4SF1P30408 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
TM4SF1P30408 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 IMP3P2-201ENST00000489760 475 ntBASIC19.48■□□□□ 0.71
TM4SF1P30408 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF1P30408 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF1P30408 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 UBL5-208ENST00000593087 320 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF1P30408 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF1P30408 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC19.48■□□□□ 0.71
TM4SF1P30408 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
TM4SF1P30408 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TM4SF1P30408 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
TM4SF1P30408 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.47■□□□□ 0.71
TM4SF1P30408 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.47■□□□□ 0.71
TM4SF1P30408 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TM4SF1P30408 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 CYP46A4P-201ENST00000414953 267 ntBASIC19.47■□□□□ 0.71
TM4SF1P30408 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.47■□□□□ 0.71
TM4SF1P30408 MPRIPP1-201ENST00000452433 1089 ntBASIC19.47■□□□□ 0.71
TM4SF1P30408 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.47■□□□□ 0.71
TM4SF1P30408 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.47■□□□□ 0.71
TM4SF1P30408 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
TM4SF1P30408 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
TM4SF1P30408 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
TM4SF1P30408 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TM4SF1P30408 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TM4SF1P30408 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF1P30408 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.46■□□□□ 0.71
TM4SF1P30408 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 TPM3P8-201ENST00000330554 643 ntBASIC19.46■□□□□ 0.71
TM4SF1P30408 NKAIN1P1-201ENST00000435754 582 ntBASIC19.46■□□□□ 0.71
TM4SF1P30408 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF1P30408 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC19.46■□□□□ 0.71
TM4SF1P30408 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC19.46■□□□□ 0.71
TM4SF1P30408 MIR4313-201ENST00000580760 101 ntBASIC19.46■□□□□ 0.71
TM4SF1P30408 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC19.46■□□□□ 0.71
TM4SF1P30408 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC19.46■□□□□ 0.71
TM4SF1P30408 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC19.46■□□□□ 0.71
TM4SF1P30408 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TM4SF1P30408 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.46■□□□□ 0.71
TM4SF1P30408 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
TM4SF1P30408 AL354989.2-201ENST00000435838 1540 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms