Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CD40LGP29965 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD40LGP29965 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD40LGP29965 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.21□□□□□ -0.13
CD40LGP29965 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.21□□□□□ -0.13
CD40LGP29965 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.21□□□□□ -0.13
CD40LGP29965 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC14.21□□□□□ -0.13
CD40LGP29965 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.21□□□□□ -0.13
CD40LGP29965 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.21□□□□□ -0.13
CD40LGP29965 AL136038.3-201ENST00000561909 1096 ntBASIC14.21□□□□□ -0.13
CD40LGP29965 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.21□□□□□ -0.13
CD40LGP29965 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.21□□□□□ -0.13
CD40LGP29965 GPR32P1-201ENST00000601788 811 ntBASIC14.21□□□□□ -0.13
CD40LGP29965 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 AC079602.3-201ENST00000623931 403 ntBASIC14.21□□□□□ -0.13
CD40LGP29965 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.21□□□□□ -0.13
CD40LGP29965 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD40LGP29965 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.21□□□□□ -0.13
CD40LGP29965 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.21□□□□□ -0.14
CD40LGP29965 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CD40LGP29965 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.21□□□□□ -0.14
CD40LGP29965 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD40LGP29965 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD40LGP29965 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD40LGP29965 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CD40LGP29965 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
CD40LGP29965 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CD40LGP29965 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
CD40LGP29965 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CD40LGP29965 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.2□□□□□ -0.14
CD40LGP29965 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 GUSBP12-201ENST00000513727 720 ntBASIC14.2□□□□□ -0.14
CD40LGP29965 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC14.2□□□□□ -0.14
CD40LGP29965 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CD40LGP29965 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CD40LGP29965 AC091076.1-201ENST00000610741 619 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms