Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN6P29350 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PTPN6P29350 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PTPN6P29350 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.16■□□□□ 0.02
PTPN6P29350 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN6P29350 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTPN6P29350 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN6P29350 AKAP8P1-201ENST00000434743 1349 ntBASIC15.16■□□□□ 0.02
PTPN6P29350 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.16■□□□□ 0.02
PTPN6P29350 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN6P29350 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN6P29350 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN6P29350 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 SPDYE11-202ENST00000450699 704 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 TIMM8BP1-201ENST00000452384 211 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 AC092183.1-201ENST00000469884 875 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 RN7SL589P-201ENST00000481268 310 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.15■□□□□ 0.02
PTPN6P29350 KRT8P48-201ENST00000515599 1220 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTPN6P29350 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 SPDYE9P-201ENST00000570642 692 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.15■□□□□ 0.02
PTPN6P29350 AC022145.2-201ENST00000598203 171 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.15■□□□□ 0.02
PTPN6P29350 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
PTPN6P29350 SPDYE10P-202ENST00000612005 668 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 SPDYE8P-202ENST00000612377 668 ntBASIC15.15■□□□□ 0.02
PTPN6P29350 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PTPN6P29350 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PTPN6P29350 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.15■□□□□ 0.02
PTPN6P29350 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTPN6P29350 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PTPN6P29350 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTPN6P29350 AC004461.1-201ENST00000412461 403 ntBASIC15.14■□□□□ 0.01
PTPN6P29350 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PTPN6P29350 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.14■□□□□ 0.01
PTPN6P29350 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.14■□□□□ 0.01
PTPN6P29350 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms