Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.7□□□□□ -0.06
ABCD3P28288 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 PHKG1P2-201ENST00000457537 863 ntBASIC14.7□□□□□ -0.06
ABCD3P28288 AC004890.2-204ENST00000481968 304 ntBASIC14.7□□□□□ -0.06
ABCD3P28288 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.7□□□□□ -0.06
ABCD3P28288 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
ABCD3P28288 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.7□□□□□ -0.06
ABCD3P28288 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.7□□□□□ -0.06
ABCD3P28288 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 AL365203.3-201ENST00000609742 2057 ntBASIC14.7□□□□□ -0.06
ABCD3P28288 AL136379.1-201ENST00000623471 2642 ntBASIC14.7□□□□□ -0.06
ABCD3P28288 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
ABCD3P28288 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
ABCD3P28288 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.7□□□□□ -0.06
ABCD3P28288 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 HYMAI-201ENST00000635591 3347 ntBASIC14.69□□□□□ -0.06
ABCD3P28288 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCD3P28288 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ABCD3P28288 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 AP003680.1-201ENST00000598970 3660 ntBASIC14.69□□□□□ -0.06
ABCD3P28288 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCD3P28288 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCD3P28288 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCD3P28288 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.69□□□□□ -0.06
ABCD3P28288 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 INGX-202ENST00000489074 768 ntBASIC14.69□□□□□ -0.06
ABCD3P28288 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCD3P28288 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCD3P28288 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.69□□□□□ -0.06
ABCD3P28288 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 AC011467.4-201ENST00000594891 528 ntBASIC14.69□□□□□ -0.06
ABCD3P28288 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.69□□□□□ -0.06
ABCD3P28288 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
ABCD3P28288 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ABCD3P28288 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms