Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.24□□□□□ -0.13
CTSSP25774 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 AC046158.3-201ENST00000624947 2558 ntBASIC14.24□□□□□ -0.13
CTSSP25774 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CTSSP25774 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSSP25774 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSSP25774 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSSP25774 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.23□□□□□ -0.13
CTSSP25774 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 AC055876.2-201ENST00000531834 546 ntBASIC14.23□□□□□ -0.13
CTSSP25774 TPRX2P-201ENST00000535362 881 ntBASIC14.23□□□□□ -0.13
CTSSP25774 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 AL136982.4-201ENST00000437689 1740 ntBASIC14.23□□□□□ -0.13
CTSSP25774 AC138969.3-201ENST00000546612 1459 ntBASIC14.23□□□□□ -0.13
CTSSP25774 AC138932.2-201ENST00000548268 1459 ntBASIC14.23□□□□□ -0.13
CTSSP25774 AC126755.4-201ENST00000549796 1459 ntBASIC14.23□□□□□ -0.13
CTSSP25774 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.23□□□□□ -0.13
CTSSP25774 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.23□□□□□ -0.13
CTSSP25774 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CTSSP25774 AL162727.3-201ENST00000635661 2787 ntBASIC14.22□□□□□ -0.13
CTSSP25774 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CTSSP25774 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSSP25774 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CTSSP25774 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.22□□□□□ -0.13
CTSSP25774 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 AC004987.2-201ENST00000395959 1148 ntBASIC14.22□□□□□ -0.13
CTSSP25774 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.22□□□□□ -0.13
CTSSP25774 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 SPDYE18-201ENST00000510091 1050 ntBASIC14.22□□□□□ -0.13
CTSSP25774 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.22□□□□□ -0.13
CTSSP25774 TIMM17BP1-201ENST00000545713 516 ntBASIC14.22□□□□□ -0.13
CTSSP25774 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.22□□□□□ -0.13
CTSSP25774 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.22□□□□□ -0.13
CTSSP25774 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.22□□□□□ -0.13
CTSSP25774 AC074044.1-201ENST00000609673 707 ntBASIC14.22□□□□□ -0.13
CTSSP25774 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CTSSP25774 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CTSSP25774 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CTSSP25774 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms