Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
LAMA1P25391 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LAMA1P25391 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.31■□□□□ 0.04
LAMA1P25391 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.31■□□□□ 0.04
LAMA1P25391 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.31■□□□□ 0.04
LAMA1P25391 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.31■□□□□ 0.04
LAMA1P25391 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.31■□□□□ 0.04
LAMA1P25391 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.31■□□□□ 0.04
LAMA1P25391 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 RPSAP36-202ENST00000494591 1261 ntBASIC15.31■□□□□ 0.04
LAMA1P25391 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.31■□□□□ 0.04
LAMA1P25391 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.31■□□□□ 0.04
LAMA1P25391 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC15.31■□□□□ 0.04
LAMA1P25391 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.31■□□□□ 0.04
LAMA1P25391 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LAMA1P25391 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
LAMA1P25391 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMA1P25391 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.3■□□□□ 0.04
LAMA1P25391 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 AC015818.8-201ENST00000587907 1519 ntBASIC15.3■□□□□ 0.04
LAMA1P25391 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 CNN2P10-201ENST00000443067 918 ntBASIC15.3■□□□□ 0.04
LAMA1P25391 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC15.3■□□□□ 0.04
LAMA1P25391 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LAMA1P25391 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LAMA1P25391 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LAMA1P25391 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMA1P25391 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LAMA1P25391 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 SPTLC1P5-201ENST00000450718 252 ntBASIC15.29■□□□□ 0.04
LAMA1P25391 SERPINA13P-202ENST00000478994 924 ntBASIC15.29■□□□□ 0.04
LAMA1P25391 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.29■□□□□ 0.04
LAMA1P25391 AC073413.1-201ENST00000603927 732 ntBASIC15.29■□□□□ 0.04
LAMA1P25391 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LAMA1P25391 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LAMA1P25391 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMA1P25391 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMA1P25391 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMA1P25391 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.29■□□□□ 0.04
LAMA1P25391 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMA1P25391 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.29■□□□□ 0.04
LAMA1P25391 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LAMA1P25391 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LAMA1P25391 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LAMA1P25391 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms