Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.05□□□□□ -0.16
RAB3BP20337 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 ELK2BP-201ENST00000415014 1224 ntBASIC14.05□□□□□ -0.16
RAB3BP20337 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.05□□□□□ -0.16
RAB3BP20337 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 MTDHP4-201ENST00000600287 670 ntBASIC14.05□□□□□ -0.16
RAB3BP20337 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
RAB3BP20337 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
RAB3BP20337 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
RAB3BP20337 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
RAB3BP20337 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
RAB3BP20337 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
RAB3BP20337 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 MIR3180-1-201ENST00000580374 94 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 MIR3180-3-201ENST00000584616 94 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 MTDHP3-201ENST00000594186 672 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 AC069148.1-201ENST00000608741 768 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 AP001282.1-201ENST00000531301 1499 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
RAB3BP20337 MROH4P-201ENST00000431302 1578 ntBASIC14.04□□□□□ -0.16
RAB3BP20337 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.04□□□□□ -0.16
RAB3BP20337 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
RAB3BP20337 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
RAB3BP20337 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB3BP20337 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.03□□□□□ -0.16
RAB3BP20337 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.03□□□□□ -0.16
RAB3BP20337 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RAB3BP20337 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
RAB3BP20337 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms