Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.23■□□□□ 0.19
NFKB1P19838 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
NFKB1P19838 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.23■□□□□ 0.19
NFKB1P19838 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.23■□□□□ 0.19
NFKB1P19838 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 MTND6P24-201ENST00000440466 518 ntBASIC16.22■□□□□ 0.19
NFKB1P19838 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.22■□□□□ 0.19
NFKB1P19838 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.22■□□□□ 0.19
NFKB1P19838 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.22■□□□□ 0.19
NFKB1P19838 RN7SL828P-201ENST00000607615 303 ntBASIC16.22■□□□□ 0.19
NFKB1P19838 AL133215.2-201ENST00000609242 977 ntBASIC16.22■□□□□ 0.19
NFKB1P19838 LINC00628-201ENST00000628516 1289 ntBASIC16.22■□□□□ 0.19
NFKB1P19838 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.22■□□□□ 0.19
NFKB1P19838 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NFKB1P19838 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.22■□□□□ 0.19
NFKB1P19838 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
NFKB1P19838 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.21■□□□□ 0.19
NFKB1P19838 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NFKB1P19838 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 AC092384.3-202ENST00000564646 2873 ntBASIC16.21■□□□□ 0.19
NFKB1P19838 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.21■□□□□ 0.19
NFKB1P19838 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 AZGP1P1-201ENST00000411909 902 ntBASIC16.21■□□□□ 0.19
NFKB1P19838 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.21■□□□□ 0.19
NFKB1P19838 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 PHKG1P2-201ENST00000457537 863 ntBASIC16.21■□□□□ 0.19
NFKB1P19838 AC109322.1-201ENST00000524499 1264 ntBASIC16.21■□□□□ 0.19
NFKB1P19838 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.21■□□□□ 0.19
NFKB1P19838 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.21■□□□□ 0.19
NFKB1P19838 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
NFKB1P19838 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.21■□□□□ 0.19
NFKB1P19838 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NFKB1P19838 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NFKB1P19838 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
NFKB1P19838 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.21■□□□□ 0.18
NFKB1P19838 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.2■□□□□ 0.18
NFKB1P19838 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.2■□□□□ 0.18
NFKB1P19838 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NFKB1P19838 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms