Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCL3L1P16619 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCL3L1P16619 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCL3L1P16619 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL3L1P16619 AL080243.2-201ENST00000418783 582 ntBASIC13.17□□□□□ -0.3
CCL3L1P16619 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3L1P16619 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL3L1P16619 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL3L1P16619 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3L1P16619 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL3L1P16619 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 AC068587.6-202ENST00000641839 5619 ntBASIC13.17□□□□□ -0.3
CCL3L1P16619 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL3L1P16619 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL3L1P16619 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL3L1P16619 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
CCL3L1P16619 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL3L1P16619 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 AC022188.1-201ENST00000620960 1664 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AZGP1P1-201ENST00000411909 902 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 SPDYE17-201ENST00000412399 783 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AC092580.3-201ENST00000430932 139 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 HLA-V-204ENST00000476601 1289 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AC097493.3-201ENST00000509725 367 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AC027796.2-201ENST00000575326 344 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AL158211.3-201ENST00000607385 239 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 TEX28P1-201ENST00000613479 1221 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 TEX28P2-201ENST00000617764 1221 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 AL390754.1-201ENST00000619088 582 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.16□□□□□ -0.3
CCL3L1P16619 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 KRT8P12-202ENST00000472924 1397 ntBASIC13.16□□□□□ -0.3
CCL3L1P16619 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CCL3L1P16619 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CCL3L1P16619 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCL3L1P16619 AP005117.1-202ENST00000581724 1908 ntBASIC13.15□□□□□ -0.3
CCL3L1P16619 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.15□□□□□ -0.3
CCL3L1P16619 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL3L1P16619 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL3L1P16619 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3L1P16619 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL3L1P16619 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3L1P16619 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3L1P16619 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CCL3L1P16619 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CCL3L1P16619 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.15□□□□□ -0.3
CCL3L1P16619 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.15□□□□□ -0.3
CCL3L1P16619 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms