Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.17□□□□□ -0.14
CTLA4P16410 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
CTLA4P16410 DNAJB3-201ENST00000446806 729 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.17□□□□□ -0.14
CTLA4P16410 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.17□□□□□ -0.14
CTLA4P16410 MIR4313-201ENST00000580760 101 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.17□□□□□ -0.14
CTLA4P16410 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.17□□□□□ -0.14
CTLA4P16410 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CTLA4P16410 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.17□□□□□ -0.14
CTLA4P16410 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
CTLA4P16410 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.16□□□□□ -0.14
CTLA4P16410 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CTLA4P16410 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 AC005237.2-201ENST00000434368 219 ntBASIC14.16□□□□□ -0.14
CTLA4P16410 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.16□□□□□ -0.14
CTLA4P16410 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 YBX1P5-201ENST00000509441 847 ntBASIC14.16□□□□□ -0.14
CTLA4P16410 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.16□□□□□ -0.14
CTLA4P16410 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.16□□□□□ -0.14
CTLA4P16410 MIR4469-201ENST00000583919 79 ntBASIC14.16□□□□□ -0.14
CTLA4P16410 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 AC055717.3-201ENST00000622967 595 ntBASIC14.16□□□□□ -0.14
CTLA4P16410 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 AL513210.1-201ENST00000629608 234 ntBASIC14.16□□□□□ -0.14
CTLA4P16410 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CTLA4P16410 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CTLA4P16410 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.16□□□□□ -0.14
CTLA4P16410 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CTLA4P16410 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms