Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CCL4P13236 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CCL4P13236 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL4P13236 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCL4P13236 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL4P13236 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 AC012441.1-201ENST00000446669 685 ntBASIC14.94□□□□□ -0.02
CCL4P13236 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.94□□□□□ -0.02
CCL4P13236 FO681548.1-201ENST00000455617 1132 ntBASIC14.94□□□□□ -0.02
CCL4P13236 KRT18P43-201ENST00000469825 1281 ntBASIC14.94□□□□□ -0.02
CCL4P13236 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL4P13236 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.94□□□□□ -0.02
CCL4P13236 AC106760.1-201ENST00000508690 800 ntBASIC14.94□□□□□ -0.02
CCL4P13236 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL4P13236 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.94□□□□□ -0.02
CCL4P13236 AP000812.2-201ENST00000538934 718 ntBASIC14.94□□□□□ -0.02
CCL4P13236 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL4P13236 AC244669.2-201ENST00000612320 853 ntBASIC14.94□□□□□ -0.02
CCL4P13236 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL4P13236 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.94□□□□□ -0.02
CCL4P13236 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CCL4P13236 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CCL4P13236 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CCL4P13236 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.93□□□□□ -0.02
CCL4P13236 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 BRWD1P1-201ENST00000401091 371 ntBASIC14.93□□□□□ -0.02
CCL4P13236 FAM21FP-201ENST00000426241 1131 ntBASIC14.93□□□□□ -0.02
CCL4P13236 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL4P13236 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.93□□□□□ -0.02
CCL4P13236 RNA5SP412-201ENST00000516234 123 ntBASIC14.93□□□□□ -0.02
CCL4P13236 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL4P13236 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL4P13236 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC14.93□□□□□ -0.02
CCL4P13236 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CCL4P13236 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 AC000095.1-201ENST00000603208 874 ntBASIC14.93□□□□□ -0.02
CCL4P13236 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 MIR6869-201ENST00000619434 62 ntBASIC14.93□□□□□ -0.02
CCL4P13236 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.93□□□□□ -0.02
CCL4P13236 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.93□□□□□ -0.02
CCL4P13236 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCL4P13236 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCL4P13236 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CCL4P13236 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL4P13236 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL4P13236 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.92□□□□□ -0.02
CCL4P13236 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.92□□□□□ -0.02
CCL4P13236 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCL4P13236 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms