Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.89□□□□□ -0.19
CSF1P09603 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CSF1P09603 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 SNX18-202ENST00000343017 3140 ntBASIC13.88□□□□□ -0.19
CSF1P09603 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.88□□□□□ -0.19
CSF1P09603 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 ABCD1P5-201ENST00000445663 754 ntBASIC13.88□□□□□ -0.19
CSF1P09603 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 MIR3687-2-201ENST00000577708 61 ntBASIC13.88□□□□□ -0.19
CSF1P09603 MIR3687-1-201ENST00000614492 61 ntBASIC13.88□□□□□ -0.19
CSF1P09603 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 AC073592.4-201ENST00000623827 446 ntBASIC13.88□□□□□ -0.19
CSF1P09603 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 U82695.1-201ENST00000635752 1889 ntBASIC13.88□□□□□ -0.19
CSF1P09603 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CSF1P09603 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CSF1P09603 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.88□□□□□ -0.19
CSF1P09603 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CSF1P09603 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CSF1P09603 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CSF1P09603 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
CSF1P09603 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.87□□□□□ -0.19
CSF1P09603 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.87□□□□□ -0.19
CSF1P09603 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 AL356488.2-201ENST00000602755 427 ntBASIC13.87□□□□□ -0.19
CSF1P09603 AC140113.2-201ENST00000604370 208 ntBASIC13.87□□□□□ -0.19
CSF1P09603 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 AC079781.4-201ENST00000641908 219 ntBASIC13.87□□□□□ -0.19
CSF1P09603 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.87□□□□□ -0.19
CSF1P09603 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
CSF1P09603 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CSF1P09603 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.87□□□□□ -0.19
CSF1P09603 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSF1P09603 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.86□□□□□ -0.19
CSF1P09603 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
CSF1P09603 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms