Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM1P09493 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM1P09493 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM1P09493 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM1P09493 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM1P09493 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM1P09493 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM1P09493 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM1P09493 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM1P09493 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM1P09493 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TPM1P09493 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.64■□□□□ 0.42
TPM1P09493 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TPM1P09493 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TPM1P09493 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TPM1P09493 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 AC026396.1-201ENST00000419388 421 ntBASIC17.64■□□□□ 0.41
TPM1P09493 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.64■□□□□ 0.41
TPM1P09493 AL513480.1-201ENST00000451731 511 ntBASIC17.64■□□□□ 0.41
TPM1P09493 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.64■□□□□ 0.41
TPM1P09493 KRT18P34-201ENST00000488218 1270 ntBASIC17.64■□□□□ 0.41
TPM1P09493 CXCL1P1-201ENST00000502804 216 ntBASIC17.64■□□□□ 0.41
TPM1P09493 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM1P09493 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.64■□□□□ 0.41
TPM1P09493 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 AC005089.1-201ENST00000619486 2241 ntBASIC17.64■□□□□ 0.41
TPM1P09493 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM1P09493 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 AP001282.1-201ENST00000531301 1499 ntBASIC17.63■□□□□ 0.41
TPM1P09493 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM1P09493 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM1P09493 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.63■□□□□ 0.41
TPM1P09493 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 AC108073.2-201ENST00000464002 357 ntBASIC17.63■□□□□ 0.41
TPM1P09493 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM1P09493 AC004790.2-201ENST00000623588 572 ntBASIC17.63■□□□□ 0.41
TPM1P09493 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
TPM1P09493 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TPM1P09493 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM1P09493 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM1P09493 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TPM1P09493 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TPM1P09493 ABR-205ENST00000544583 5595 ntTSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TPM1P09493 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms