Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL645728.2-201ENST00000641974 660 ntBASIC13.96□□□□□ -0.17
SFTPBP07988 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.96□□□□□ -0.17
SFTPBP07988 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC13.96□□□□□ -0.17
SFTPBP07988 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SFTPBP07988 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.18
SFTPBP07988 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC13.96□□□□□ -0.18
SFTPBP07988 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 LINC02447-202ENST00000501888 2146 ntBASIC13.96□□□□□ -0.18
SFTPBP07988 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SFTPBP07988 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
SFTPBP07988 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 PMS2P4-201ENST00000412466 1052 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 MCCD1P2-201ENST00000423228 335 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.95□□□□□ -0.18
SFTPBP07988 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 RHOQP3-201ENST00000437982 621 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 ALG1L5P-201ENST00000482043 771 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.95□□□□□ -0.18
SFTPBP07988 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 MIR3909-201ENST00000579518 119 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.95□□□□□ -0.18
SFTPBP07988 AL078644.1-201ENST00000609881 752 ntBASIC13.95□□□□□ -0.18
SFTPBP07988 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SFTPBP07988 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SFTPBP07988 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.95□□□□□ -0.18
SFTPBP07988 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SFTPBP07988 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SFTPBP07988 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.94□□□□□ -0.18
SFTPBP07988 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SFTPBP07988 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms