Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 AGAP7P-201ENST00000582299 2062 ntBASIC17.96■□□□□ 0.47
TPM3P06753 AGAP14-201ENST00000624701 2060 ntBASIC17.96■□□□□ 0.47
TPM3P06753 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TPM3P06753 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.96■□□□□ 0.47
TPM3P06753 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 AC008608.2-201ENST00000606089 416 ntBASIC17.96■□□□□ 0.47
TPM3P06753 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TPM3P06753 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TPM3P06753 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TPM3P06753 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TPM3P06753 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TPM3P06753 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TPM3P06753 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
TPM3P06753 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TPM3P06753 GSN-215ENST00000545652 2428 ntTSL 2 BASIC17.96■□□□□ 0.46
TPM3P06753 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 C8orf49-201ENST00000525043 1968 ntBASIC17.95■□□□□ 0.46
TPM3P06753 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.95■□□□□ 0.46
TPM3P06753 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 FGFR3P6-201ENST00000457012 610 ntBASIC17.95■□□□□ 0.46
TPM3P06753 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.95■□□□□ 0.46
TPM3P06753 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TPM3P06753 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 AC011477.6-201ENST00000604980 1927 ntBASIC17.95■□□□□ 0.46
TPM3P06753 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.95■□□□□ 0.46
TPM3P06753 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TPM3P06753 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TPM3P06753 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TPM3P06753 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.94■□□□□ 0.46
TPM3P06753 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM3P06753 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.94■□□□□ 0.46
TPM3P06753 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TPM3P06753 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TPM3P06753 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms