Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CHGBP05060 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 AC098850.1-201ENST00000419919 790 ntBASIC19.07■□□□□ 0.64
CHGBP05060 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.07■□□□□ 0.64
CHGBP05060 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 DOC2GP-202ENST00000514950 1163 ntBASIC19.07■□□□□ 0.64
CHGBP05060 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CHGBP05060 API5-211ENST00000534695 560 ntTSL 5 BASIC19.07■□□□□ 0.64
CHGBP05060 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CHGBP05060 AC190387.1-201ENST00000551683 408 ntBASIC19.07■□□□□ 0.64
CHGBP05060 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.07■□□□□ 0.64
CHGBP05060 AL391069.4-201ENST00000609583 481 ntBASIC19.07■□□□□ 0.64
CHGBP05060 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC19.07■□□□□ 0.64
CHGBP05060 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.07■□□□□ 0.64
CHGBP05060 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 BTBD7P1-201ENST00000447253 1453 ntBASIC19.07■□□□□ 0.64
CHGBP05060 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.07■□□□□ 0.64
CHGBP05060 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CHGBP05060 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.06■□□□□ 0.64
CHGBP05060 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC19.06■□□□□ 0.64
CHGBP05060 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.06■□□□□ 0.64
CHGBP05060 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC19.06■□□□□ 0.64
CHGBP05060 FAM207CP-201ENST00000443486 507 ntBASIC19.06■□□□□ 0.64
CHGBP05060 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC19.06■□□□□ 0.64
CHGBP05060 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.06■□□□□ 0.64
CHGBP05060 AC092337.1-201ENST00000568699 1129 ntBASIC19.06■□□□□ 0.64
CHGBP05060 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.06■□□□□ 0.64
CHGBP05060 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CHGBP05060 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CHGBP05060 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.05■□□□□ 0.64
CHGBP05060 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.05■□□□□ 0.64
CHGBP05060 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CHGBP05060 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.05■□□□□ 0.64
CHGBP05060 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 WASH4P-201ENST00000564273 1246 ntBASIC19.05■□□□□ 0.64
CHGBP05060 AL132655.2-201ENST00000596276 594 ntBASIC19.05■□□□□ 0.64
CHGBP05060 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.05■□□□□ 0.64
CHGBP05060 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.05■□□□□ 0.64
CHGBP05060 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
CHGBP05060 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.05■□□□□ 0.64
CHGBP05060 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CHGBP05060 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 CLK3P2-201ENST00000427566 1453 ntBASIC19.04■□□□□ 0.64
CHGBP05060 AC007541.1-201ENST00000570282 1469 ntBASIC19.04■□□□□ 0.64
CHGBP05060 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.04■□□□□ 0.64
CHGBP05060 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CHGBP05060 MBP-202ENST00000355994 2772 ntTSL 5 BASIC19.04■□□□□ 0.64
CHGBP05060 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.04■□□□□ 0.64
CHGBP05060 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
CHGBP05060 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC19.04■□□□□ 0.64
CHGBP05060 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CHGBP05060 TERF1P3-201ENST00000505638 1227 ntBASIC19.04■□□□□ 0.64
CHGBP05060 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms