Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC9.68□□□□□ -0.86
APOBP04114 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 RTN3P1-201ENST00000536295 711 ntBASIC9.68□□□□□ -0.86
APOBP04114 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC9.68□□□□□ -0.86
APOBP04114 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC9.68□□□□□ -0.86
APOBP04114 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 MFF-204ENST00000353339 2186 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC9.68□□□□□ -0.86
APOBP04114 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 AC106820.3-201ENST00000561653 397 ntBASIC9.68□□□□□ -0.86
APOBP04114 COX6A1P2-201ENST00000620597 330 ntBASIC9.68□□□□□ -0.86
APOBP04114 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC9.68□□□□□ -0.86
APOBP04114 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 AC006453.1-201ENST00000636037 1257 ntBASIC9.68□□□□□ -0.86
APOBP04114 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
APOBP04114 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
APOBP04114 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
APOBP04114 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 AL136309.1-201ENST00000403917 691 ntBASIC9.67□□□□□ -0.86
APOBP04114 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 SNORD3B-2-202ENST00000571722 791 ntBASIC9.67□□□□□ -0.86
APOBP04114 GPR39-203ENST00000622084 900 ntTSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 AL161773.1-201ENST00000624845 863 ntBASIC9.67□□□□□ -0.86
APOBP04114 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
APOBP04114 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 AC013355.1-201ENST00000562625 723 ntBASIC9.67□□□□□ -0.86
APOBP04114 TBCB-211ENST00000589996 724 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 AC020922.3-201ENST00000595064 547 ntBASIC9.67□□□□□ -0.86
APOBP04114 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 AC078991.1-201ENST00000437297 610 ntBASIC9.67□□□□□ -0.86
APOBP04114 AL139008.1-201ENST00000437894 228 ntBASIC9.67□□□□□ -0.86
APOBP04114 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
APOBP04114 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC9.67□□□□□ -0.86
APOBP04114 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 CYP51A1P3-201ENST00000400072 1428 ntBASIC9.67□□□□□ -0.86
APOBP04114 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
APOBP04114 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
APOBP04114 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.66□□□□□ -0.86
APOBP04114 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC9.66□□□□□ -0.86
APOBP04114 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
APOBP04114 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms