Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.98□□□□□ -0.01
PDGFAP04085 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDGFAP04085 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 AC022210.1-201ENST00000449856 793 ntBASIC14.98□□□□□ -0.01
PDGFAP04085 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.98□□□□□ -0.01
PDGFAP04085 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 MIR4259-201ENST00000584466 101 ntBASIC14.98□□□□□ -0.01
PDGFAP04085 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 SRD5A3P1-201ENST00000603021 949 ntBASIC14.98□□□□□ -0.01
PDGFAP04085 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.98□□□□□ -0.01
PDGFAP04085 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PDGFAP04085 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.98□□□□□ -0.01
PDGFAP04085 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.98□□□□□ -0.01
PDGFAP04085 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PDGFAP04085 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PDGFAP04085 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
PDGFAP04085 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.97□□□□□ -0.01
PDGFAP04085 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 TMEM14DP-201ENST00000422205 345 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.97□□□□□ -0.01
PDGFAP04085 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFAP04085 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PDGFAP04085 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFAP04085 AC023310.3-201ENST00000557027 670 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 AC100756.1-201ENST00000562736 682 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 AC138749.3-201ENST00000567691 622 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 AC106886.1-201ENST00000568660 600 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 CTBP2P3-201ENST00000585629 1255 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC14.97□□□□□ -0.01
PDGFAP04085 AC116165.1-201ENST00000611806 668 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 AC004461.2-201ENST00000629517 803 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 KRT8P39-201ENST00000396270 1433 ntBASIC14.97□□□□□ -0.01
PDGFAP04085 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PDGFAP04085 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.97□□□□□ -0.01
PDGFAP04085 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms