Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.2■□□□□ 0.34
CHRNA1P02708 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 MIR648-201ENST00000385046 94 ntBASIC17.2■□□□□ 0.34
CHRNA1P02708 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.2■□□□□ 0.34
CHRNA1P02708 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA1P02708 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.2■□□□□ 0.34
CHRNA1P02708 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA1P02708 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA1P02708 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRNA1P02708 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA1P02708 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRNA1P02708 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
CHRNA1P02708 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRNA1P02708 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRNA1P02708 TUBB1P2-201ENST00000422712 1306 ntBASIC17.2■□□□□ 0.34
CHRNA1P02708 TUBB1P1-201ENST00000503144 1300 ntBASIC17.2■□□□□ 0.34
CHRNA1P02708 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CHRNA1P02708 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA1P02708 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 AC016694.1-201ENST00000434179 700 ntBASIC17.19■□□□□ 0.34
CHRNA1P02708 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.19■□□□□ 0.34
CHRNA1P02708 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRNA1P02708 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CHRNA1P02708 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 MIR6869-201ENST00000619434 62 ntBASIC17.19■□□□□ 0.34
CHRNA1P02708 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CHRNA1P02708 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 PCDHA12-202ENST00000613593 2588 ntBASIC17.19■□□□□ 0.34
CHRNA1P02708 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRNA1P02708 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRNA1P02708 AC124067.4-201ENST00000519691 2379 ntBASIC17.18■□□□□ 0.34
CHRNA1P02708 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 AC011477.6-201ENST00000604980 1927 ntBASIC17.18■□□□□ 0.34
CHRNA1P02708 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.18■□□□□ 0.34
CHRNA1P02708 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 GNRHR2-203ENST00000581100 1187 ntBASIC17.18■□□□□ 0.34
CHRNA1P02708 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.18■□□□□ 0.34
CHRNA1P02708 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRNA1P02708 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CHRNA1P02708 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRNA1P02708 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms