Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.52■□□□□ 0.07
KRT6AP02538 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
KRT6AP02538 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
KRT6AP02538 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KRT6AP02538 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KRT6AP02538 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 AC040169.1-201ENST00000565382 521 ntBASIC15.51■□□□□ 0.07
KRT6AP02538 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.51■□□□□ 0.07
KRT6AP02538 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.51■□□□□ 0.07
KRT6AP02538 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
KRT6AP02538 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
KRT6AP02538 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
KRT6AP02538 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.51■□□□□ 0.07
KRT6AP02538 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
KRT6AP02538 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
KRT6AP02538 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 AC020658.6-201ENST00000623564 1870 ntBASIC15.5■□□□□ 0.07
KRT6AP02538 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.5■□□□□ 0.07
KRT6AP02538 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT6AP02538 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT6AP02538 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 AC023274.1-201ENST00000418278 595 ntBASIC15.5■□□□□ 0.07
KRT6AP02538 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.5■□□□□ 0.07
KRT6AP02538 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT6AP02538 RNA5SP410-201ENST00000516285 106 ntBASIC15.5■□□□□ 0.07
KRT6AP02538 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT6AP02538 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
KRT6AP02538 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.5■□□□□ 0.07
KRT6AP02538 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 AL691432.1-201ENST00000596308 1422 ntBASIC15.5■□□□□ 0.07
KRT6AP02538 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
KRT6AP02538 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.5■□□□□ 0.07
KRT6AP02538 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 AC073347.1-201ENST00000421633 2643 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 AL161772.1-201ENST00000610494 4412 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 FOXO1B-201ENST00000504678 1527 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
KRT6AP02538 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
KRT6AP02538 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.49■□□□□ 0.07
KRT6AP02538 AC142381.1-201ENST00000426099 345 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 SPDYE11-202ENST00000450699 704 ntBASIC15.49■□□□□ 0.07
KRT6AP02538 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.49■□□□□ 0.07
KRT6AP02538 SPDYE9P-201ENST00000570642 692 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms