Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LTN1O94822 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 LINC02447-202ENST00000501888 2146 ntBASIC20.67■□□□□ 0.9
LTN1O94822 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 CSH2-202ENST00000345366 598 ntTSL 5 BASIC20.67■□□□□ 0.9
LTN1O94822 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LTN1O94822 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.67■□□□□ 0.9
LTN1O94822 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC20.67■□□□□ 0.9
LTN1O94822 RN7SL713P-201ENST00000582127 302 ntBASIC20.67■□□□□ 0.9
LTN1O94822 AL022328.3-201ENST00000607943 679 ntBASIC20.67■□□□□ 0.9
LTN1O94822 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.67■□□□□ 0.9
LTN1O94822 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.67■□□□□ 0.9
LTN1O94822 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.67■□□□□ 0.9
LTN1O94822 MPV17-205ENST00000402310 906 ntTSL 5 BASIC20.67■□□□□ 0.9
LTN1O94822 GHSR-202ENST00000427970 912 ntBASIC20.67■□□□□ 0.9
LTN1O94822 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC20.67■□□□□ 0.9
LTN1O94822 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
LTN1O94822 AC105129.2-201ENST00000559536 390 ntBASIC20.67■□□□□ 0.9
LTN1O94822 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC20.67■□□□□ 0.9
LTN1O94822 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.67■□□□□ 0.9
LTN1O94822 PRSS30P-206ENST00000641773 873 ntBASIC20.67■□□□□ 0.9
LTN1O94822 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LTN1O94822 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC20.67■□□□□ 0.9
LTN1O94822 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LTN1O94822 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LTN1O94822 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
LTN1O94822 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
LTN1O94822 RPS3-201ENST00000278572 907 ntTSL 3 BASIC20.66■□□□□ 0.9
LTN1O94822 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LTN1O94822 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 HIST2H2BC-201ENST00000498492 580 ntBASIC20.66■□□□□ 0.9
LTN1O94822 AC023310.1-201ENST00000554836 735 ntBASIC20.66■□□□□ 0.9
LTN1O94822 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LTN1O94822 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC20.66■□□□□ 0.9
LTN1O94822 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC20.66■□□□□ 0.9
LTN1O94822 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.66■□□□□ 0.9
LTN1O94822 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LTN1O94822 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LTN1O94822 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.66■□□□□ 0.9
LTN1O94822 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 AC084364.1-201ENST00000551967 1556 ntBASIC20.65■□□□□ 0.9
LTN1O94822 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.65■□□□□ 0.9
LTN1O94822 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LTN1O94822 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 FAM8A4P-201ENST00000435433 1213 ntBASIC20.65■□□□□ 0.9
LTN1O94822 AC004898.1-201ENST00000451057 766 ntBASIC20.65■□□□□ 0.9
LTN1O94822 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.65■□□□□ 0.9
LTN1O94822 RNA5SP486-201ENST00000515961 83 ntBASIC20.65■□□□□ 0.9
LTN1O94822 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC20.65■□□□□ 0.9
LTN1O94822 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LTN1O94822 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms