Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 MIR346-201ENST00000362234 95 ntBASIC16.08■□□□□ 0.16
GPC4O75487 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.08■□□□□ 0.16
GPC4O75487 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.08■□□□□ 0.16
GPC4O75487 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.08■□□□□ 0.16
GPC4O75487 AC105233.2-201ENST00000523697 349 ntBASIC16.08■□□□□ 0.16
GPC4O75487 AF228730.5-201ENST00000530288 346 ntBASIC16.08■□□□□ 0.16
GPC4O75487 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.08■□□□□ 0.16
GPC4O75487 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.08■□□□□ 0.16
GPC4O75487 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.08■□□□□ 0.16
GPC4O75487 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
GPC4O75487 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
GPC4O75487 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
GPC4O75487 AP005117.1-202ENST00000581724 1908 ntBASIC16.07■□□□□ 0.16
GPC4O75487 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
GPC4O75487 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 TIMM8BP1-201ENST00000452384 211 ntBASIC16.07■□□□□ 0.16
GPC4O75487 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 KRT8P23-201ENST00000560090 1207 ntBASIC16.07■□□□□ 0.16
GPC4O75487 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.07■□□□□ 0.16
GPC4O75487 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.07■□□□□ 0.16
GPC4O75487 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.07■□□□□ 0.16
GPC4O75487 AL513210.1-201ENST00000629608 234 ntBASIC16.07■□□□□ 0.16
GPC4O75487 AC084121.4-201ENST00000641598 221 ntBASIC16.07■□□□□ 0.16
GPC4O75487 AF228730.8-201ENST00000642140 221 ntBASIC16.07■□□□□ 0.16
GPC4O75487 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.07■□□□□ 0.16
GPC4O75487 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.07■□□□□ 0.16
GPC4O75487 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 FOXO1B-201ENST00000504678 1527 ntBASIC16.07■□□□□ 0.16
GPC4O75487 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GPC4O75487 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GPC4O75487 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 AL589702.1-201ENST00000641229 1509 ntBASIC16.06■□□□□ 0.16
GPC4O75487 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GPC4O75487 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 KRT18P13-201ENST00000400056 1290 ntBASIC16.06■□□□□ 0.16
GPC4O75487 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.06■□□□□ 0.16
GPC4O75487 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.06■□□□□ 0.16
GPC4O75487 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.06■□□□□ 0.16
GPC4O75487 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms