Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
PCDHGA12O60330 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.84■□□□□ 0.13
PCDHGA12O60330 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA12O60330 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.83■□□□□ 0.13
PCDHGA12O60330 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA12O60330 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
PCDHGA12O60330 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
PCDHGA12O60330 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.83■□□□□ 0.13
PCDHGA12O60330 AL512652.2-201ENST00000625156 1716 ntBASIC15.83■□□□□ 0.13
PCDHGA12O60330 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 AC007389.4-201ENST00000454674 793 ntBASIC15.83■□□□□ 0.12
PCDHGA12O60330 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 CTBP2P3-201ENST00000585629 1255 ntBASIC15.83■□□□□ 0.12
PCDHGA12O60330 TMEM261P1-201ENST00000604899 340 ntBASIC15.83■□□□□ 0.12
PCDHGA12O60330 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 AL645728.1-201ENST00000366221 2101 ntBASIC15.83■□□□□ 0.12
PCDHGA12O60330 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
PCDHGA12O60330 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
PCDHGA12O60330 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AL512343.1-201ENST00000605837 169 ntBASIC15.82■□□□□ 0.12
PCDHGA12O60330 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AC092364.2-201ENST00000596710 2692 ntBASIC15.82■□□□□ 0.12
PCDHGA12O60330 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 HYMAI-201ENST00000635591 3347 ntBASIC15.82■□□□□ 0.12
PCDHGA12O60330 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 AL391256.1-201ENST00000443260 1855 ntBASIC15.82■□□□□ 0.12
PCDHGA12O60330 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.82■□□□□ 0.12
PCDHGA12O60330 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PCDHGA12O60330 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms