Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.08□□□□□ -0.32
SSSCA1O60232 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 RCN1P1-201ENST00000400413 996 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 AC132008.2-207ENST00000454517 770 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 AC012615.1-201ENST00000565797 1299 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 AC004706.3-202ENST00000621574 984 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 AL805961.1-202ENST00000641562 540 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 LINC00528-201ENST00000600723 2160 ntBASIC13.08□□□□□ -0.32
SSSCA1O60232 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SSSCA1O60232 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.08□□□□□ -0.32
SSSCA1O60232 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
SSSCA1O60232 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SSSCA1O60232 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.08□□□□□ -0.32
SSSCA1O60232 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 LINC00552-201ENST00000625151 2579 ntBASIC13.07□□□□□ -0.32
SSSCA1O60232 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.07□□□□□ -0.32
SSSCA1O60232 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.07□□□□□ -0.32
SSSCA1O60232 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.07□□□□□ -0.32
SSSCA1O60232 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.07□□□□□ -0.32
SSSCA1O60232 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.07□□□□□ -0.32
SSSCA1O60232 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSSCA1O60232 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.07□□□□□ -0.32
SSSCA1O60232 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.07□□□□□ -0.32
SSSCA1O60232 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC13.07□□□□□ -0.32
SSSCA1O60232 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms