Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.92■□□□□ 0.14
PHGDHO43175 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PHGDHO43175 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.92■□□□□ 0.14
PHGDHO43175 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 AC105250.1-201ENST00000509378 2057 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 AC023157.3-201ENST00000619086 2088 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PHGDHO43175 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 AL671277.1-201ENST00000429656 993 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 AL591424.1-201ENST00000442569 1213 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PHGDHO43175 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.91■□□□□ 0.14
PHGDHO43175 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.91■□□□□ 0.14
PHGDHO43175 AC027307.2-201ENST00000591252 911 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.91■□□□□ 0.14
PHGDHO43175 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 AC090616.6-203ENST00000579186 1945 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PHGDHO43175 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PHGDHO43175 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.91■□□□□ 0.14
PHGDHO43175 AC138035.3-201ENST00000622706 2791 ntBASIC15.91■□□□□ 0.14
PHGDHO43175 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PHGDHO43175 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PHGDHO43175 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.9■□□□□ 0.14
PHGDHO43175 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PHGDHO43175 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PHGDHO43175 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC15.9■□□□□ 0.14
PHGDHO43175 TFAMP1-201ENST00000412727 736 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 FAM58CP-201ENST00000435741 640 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.9■□□□□ 0.14
PHGDHO43175 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.9■□□□□ 0.14
PHGDHO43175 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.9■□□□□ 0.14
PHGDHO43175 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.9■□□□□ 0.14
PHGDHO43175 FAM197Y3-203ENST00000618346 717 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 AL691432.1-201ENST00000596308 1422 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 BNIP3P1-202ENST00000550043 1585 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.9■□□□□ 0.14
PHGDHO43175 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.9■□□□□ 0.14
PHGDHO43175 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.9■□□□□ 0.14
PHGDHO43175 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 AKAP8P1-201ENST00000434743 1349 ntBASIC15.9■□□□□ 0.14
PHGDHO43175 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PHGDHO43175 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PHGDHO43175 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms