Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 NKILA-202ENST00000614771 2598 ntBASIC18.17■□□□□ 0.5
ATP2A1O14983 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 MIR648-201ENST00000385046 94 ntBASIC18.17■□□□□ 0.5
ATP2A1O14983 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.17■□□□□ 0.5
ATP2A1O14983 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.17■□□□□ 0.5
ATP2A1O14983 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.17■□□□□ 0.5
ATP2A1O14983 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 AC124283.3-201ENST00000570869 594 ntBASIC18.17■□□□□ 0.5
ATP2A1O14983 NAA38-206ENST00000576384 424 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 Six3os1_5.1-201ENST00000611000 271 ntBASIC18.17■□□□□ 0.5
ATP2A1O14983 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
ATP2A1O14983 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP2A1O14983 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A1O14983 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 RPL13AP25-201ENST00000484130 612 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.16■□□□□ 0.5
ATP2A1O14983 AL359711.2-201ENST00000563105 872 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 AP005482.1-201ENST00000563722 1273 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.16■□□□□ 0.5
ATP2A1O14983 AC233724.13-201ENST00000598383 410 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 CU634019.7-201ENST00000624153 1185 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 FP236241.2-201ENST00000624906 1185 ntBASIC18.16■□□□□ 0.5
ATP2A1O14983 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
ATP2A1O14983 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.16■□□□□ 0.5
ATP2A1O14983 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.16■□□□□ 0.5
ATP2A1O14983 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
ATP2A1O14983 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A1O14983 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATP2A1O14983 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.15■□□□□ 0.5
ATP2A1O14983 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
ATP2A1O14983 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.15■□□□□ 0.5
ATP2A1O14983 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
ATP2A1O14983 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
ATP2A1O14983 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.15■□□□□ 0.5
ATP2A1O14983 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.15■□□□□ 0.5
ATP2A1O14983 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms