Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AP000593.2-201ENST00000542775 1433 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 VDAC1P1-201ENST00000439229 848 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC004066.1-201ENST00000502488 802 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 NSD1-211ENST00000511258 809 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 FOS-204ENST00000554617 796 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 RN7SL163P-201ENST00000583100 276 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AC005632.3-201ENST00000605544 308 ntBASIC19.6■□□□□ 0.73
RGPD3A6NKT7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.6■□□□□ 0.73
RGPD3A6NKT7 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 HNRNPA1P41-201ENST00000397777 928 ntBASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 MIR6842-201ENST00000612539 65 ntBASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 AC020916.1-201ENST00000587762 1774 ntBASIC19.59■□□□□ 0.73
RGPD3A6NKT7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.59■□□□□ 0.73
RGPD3A6NKT7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RGPD3A6NKT7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RGPD3A6NKT7 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 SNORD3B-2-202ENST00000571722 791 ntBASIC19.57■□□□□ 0.72
RGPD3A6NKT7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 RN7SL258P-201ENST00000478664 300 ntBASIC19.57■□□□□ 0.72
RGPD3A6NKT7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RGPD3A6NKT7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms