Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 SLC25A47P1-201ENST00000531577 414 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PTP4A1P2-201ENST00000546033 454 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AP005482.1-201ENST00000563722 1273 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AC009486.1-201ENST00000569860 813 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AC015910.1-201ENST00000579400 975 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 MIR4313-201ENST00000580760 101 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 AC018665.1-201ENST00000622927 1362 ntBASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
MBD3L3A6NE82 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
MBD3L3A6NE82 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.9□□□□□ -0.19
MBD3L3A6NE82 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
MBD3L3A6NE82 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
MBD3L3A6NE82 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 AC026410.3-201ENST00000514280 936 ntBASIC13.89□□□□□ -0.19
MBD3L3A6NE82 AC068587.3-201ENST00000526613 355 ntBASIC13.89□□□□□ -0.19
MBD3L3A6NE82 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 AL022328.1-201ENST00000610050 478 ntBASIC13.89□□□□□ -0.19
MBD3L3A6NE82 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
MBD3L3A6NE82 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AC005229.1-201ENST00000392885 409 ntBASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 RPS2P32-201ENST00000439199 892 ntBASIC13.88□□□□□ -0.19
MBD3L3A6NE82 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 CROCCP4-201ENST00000457096 498 ntBASIC13.88□□□□□ -0.19
MBD3L3A6NE82 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.88□□□□□ -0.19
MBD3L3A6NE82 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms