Protein–RNA interactions for Protein: A4UGR9

XIRP2, Xin actin-binding repeat-containing protein 2, humanhuman

Predictions only

Length 3,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP2A4UGR9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 AC005915.1-201ENST00000624912 2018 ntBASIC16.31■□□□□ 0.2
XIRP2A4UGR9 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 KRT18P43-201ENST00000469825 1281 ntBASIC16.31■□□□□ 0.2
XIRP2A4UGR9 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
XIRP2A4UGR9 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 PRSS30P-206ENST00000641773 873 ntBASIC16.3■□□□□ 0.2
XIRP2A4UGR9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 AC026316.1-201ENST00000398900 414 ntBASIC16.3■□□□□ 0.2
XIRP2A4UGR9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
XIRP2A4UGR9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 IDS-203ENST00000428056 1213 ntTSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AL359258.3-201ENST00000622910 2331 ntBASIC16.29■□□□□ 0.2
XIRP2A4UGR9 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AC100757.4-201ENST00000626934 759 ntBASIC16.29■□□□□ 0.2
XIRP2A4UGR9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
XIRP2A4UGR9 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
XIRP2A4UGR9 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms