Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 LINC00528-201ENST00000600723 2160 ntBASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ISCU-203ENST00000431221 799 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 KRT18P31-201ENST00000506277 1292 ntBASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AC109635.5-201ENST00000533593 962 ntBASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AC002347.1-201ENST00000569543 541 ntBASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ACTL9-202ENST00000612068 1252 ntBASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.06□□□□□ -0.32
DUXBA0A1W2PPF3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AC007191.1-201ENST00000623179 2995 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 FGD5P1-202ENST00000614866 2498 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AC148477.4-201ENST00000613430 1793 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AC243562.2-201ENST00000561247 970 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AC092119.3-201ENST00000612618 583 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 AC091951.1-201ENST00000512854 2465 ntBASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
DUXBA0A1W2PPF3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms