Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CNN2P10-201ENST00000443067 918 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AC104784.1-201ENST00000473096 294 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 MIR3147-201ENST00000577811 66 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AC015910.1-201ENST00000579400 975 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 RN7SL555P-201ENST00000584742 339 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AL133499.1-201ENST00000596207 608 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AC091544.8-201ENST00000619490 361 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM17Q9Y577 AC011270.2-201ENST00000624293 2550 ntBASIC17.86■□□□□ 0.45
TRIM17Q9Y577 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 KRT18P43-201ENST00000469825 1281 ntBASIC17.85■□□□□ 0.45
TRIM17Q9Y577 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ECM1P1-201ENST00000604092 1279 ntBASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TRIM17Q9Y577 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.84■□□□□ 0.45
TRIM17Q9Y577 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRIM17Q9Y577 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms